Keyser's Particle Analysis Thread
- KeyserSoze
- the space duck queen
- Reactions: 2904
- Posts: 4071
- Joined: Wed Feb 19, 2020 3:15 am
- Location: Los Angeles
Keyser's Particle Analysis Thread
THE BACKGROUND
Ok time for the big long thing I did over the summer, the most proud I have ever been of myself in my life thus far. It feels weird being the only scientist in our group now, and this fiasco with Matt has made me realize that even if I don't have ten phds and a billion acres of research land in Australia, at least I have done some cool things with my craft.
Let me preface this by saying that all of this is going to make me seem like a genius. I assure you, I am not. I actually managed to fail calc 1 about three times. I struggle with math every single day, but I refuse to give up. It's opportunities like this that keep me going. Remember that telescope project from the previous year? This is like that on steroids. I also need to say that I'm not actually a student at UCLA, I am an employee. I was paid handsomely for this project, but so was everyone else in my cohort. We are in an Scholars Undergraduate Research program, there are about 12 of us from my school that qualified. We had to take a bunch of classes, buy suits, do mock interviews, they extensively prepared us for our research labs. I will say that as a scholar, I have a 4.0 IF YOU DON'T LOOK AT MY MATH GRADES. SERIOUSLY, LOOK AWAY LEST THEE BE TURNED TO STONE. Luckily for me, I'm fantastic at most everything else academic, and also my skills with reading, writing, and speaking give me a massive advantage because most STEM students can't do any of that at all.
So! I wanted to do Astrophysics, and the lab I originally applied to was called https://gaps1.astro.ucla.edu/gaps/ GAPS. This is a weather balloon they will launch into the atmosphere in Antarctica to search for dark matter. Can you believe it? But no, I wasn't ready for this lab because honestly, I am just not there with my math or physics yet. I cried. Oh, I cried.
THE LAB
So I was placed at the David Geffen School of Medicine in the Orthopedic Research Center. I went in with a BAD attitude, guys. This is not to say I showed it on my exterior, or was rude to anyone of course, but I WAS PISSED. A medical school? But I don't even LIKE PEOPLE, you guys. I've never even taken ANATOMY. I've never even taken BIO. When they told me I had to take a biological science for my degree, I picked fucking Botany. You know why? Because I would rather work with fucking plants than work with people, haha. I was going to work with an antiparticle dark matter balloon, and now I was going to work with... humans *shudder*
However, I really ended up being the luckiest girl in the whole world. Dr. Fabrizio Billi's lab was a great fit for me. Not only were the other student researchers so kind and fun to work with, but they accepted me immediately. Dr. Billi is from Italy and his student researchers are from all over the globe. Every day I would come to lab and walk through the halls, hearing so many different accents and languages. I was the only one who wasn't a med student, lol. With my interest in physics, Dr. Billi found a great project for me.
THE PROJECT
One of the conditions the Billi Lab is currently researching is called Osteolysis. Basically, people will sometimes need a surgical orthopedic joint implant, like the ones I have in my spine only these are in the case of a knee, hip, or shoulder. Due to the nature of a joint bearing, over time, metal-on-metal (MOM) nanoparticles will be released into the joint site leading to a poisoning of the bone and blood called Osteolysis. There is no way to get these nanoparticles out of the patient once they are in there, so the best bet is to prevent the implant from failing in the first place. This is where we come in.
In the past, nanoparticle analysis from MOM wear was always difficult to determine, due to the nature of their nanoscale size and how few of them could be collected. It was like searching for a needle in a haystack. It was actually Dr. Billi who came up with the new, industry standard protocol for how scientists the world over accurately measure and analyze their nanoparticles from MOM wear. Orthopedic companies (such as Depuy Synthe, this is the one that I worked on) will take the implant that they have created, stick it in an orbital load simulator, and agitate the simulated synovial fluid with the implant. They will then send us the fluid, and then we analyze it for nanoparticles. This is a three step process:
1.) Spin the fluid down in the centrifuge at 184,000 gs for 4 hours, we obtain at the bottom of the test tube a pellet of particles and proteins.
2.) We are not interested in the proteins, so we need to add solutions that will break apart the proteins and leave us with the particles. We place a silicone wafer coated in a monolayer of marine mussel glue at the bottom of the second test tube, and due to the nature of solutions of varying densities, the proteins will get lost in the denaturant layer while the MOM nanoparticles are heavy enough to pass through it. We spin it down using density centrifugation again, and the particles adhere to the glue on the silicon wafer. We then take the wafer to be analyzed by...
3.) The EDS integrated into the SEM. This is a powerful Scanning Electron Microscope housed at the basement of the CNSI building at UCLA. You (the researcher) shoot a high powered electron beam at the sample, this causes an electron to become ejected from its orbital, hit the detector, and produce an XRay image for you in a gray scale. You tell the computers all of the parameters for which you'd like to set (ours is between 1-5 microns) and the machine will show you all of the particles that fit those preferences. Then, the Energy Dispersive X-Ray Analysis system will come into play. When the secondary electron becomes ejected, it leaves behind a hole. Other electrons will drop down and replace that hole. This transition releases much energy, energy is directly proportionate to frequency, and each element has its own unique frequency. The machine can then compare it to a library of all the known elements and tell you what your sample is composed of.
So at the end, Dr. Billi sends all of this information I've collected back to Depuy, and we tell them, "hey you assholes, you are leaching cobalt chromium oxide into poor people's bodies, you're going to kill someone you absolute load of buffoons."
And then Dr. Billi gets a trophy. No seriously! He won the John Charnley Award because of inventing this protocol. It's a very prestigious award from the hip society.
For my program, my cohort had to do two presentations about our lab research projects. One was a poster presentation. The other... was a speech that we had to give in a massive lecture hall, it was open to the public, and people were allowed to ask questions. DO YOU KNOW HOW TERRIFYING THAT WAS?! But I did it, and I have never been more proud of myself. I look bitchin in a suit, too.
So this was one of the greatest experiences of my life. I got paid, I got to live on campus, I got to use the UCLA gym and eat at all the yummy places on campus (there's even a Wolfgang Puck, I wish I were lying) and most importantly: I learned that I absolutely love being a scientist, a researcher, and that I am on the right path. I can only image what the universe has in store for me next. :)
Here, have some photos.
Ok time for the big long thing I did over the summer, the most proud I have ever been of myself in my life thus far. It feels weird being the only scientist in our group now, and this fiasco with Matt has made me realize that even if I don't have ten phds and a billion acres of research land in Australia, at least I have done some cool things with my craft.
Let me preface this by saying that all of this is going to make me seem like a genius. I assure you, I am not. I actually managed to fail calc 1 about three times. I struggle with math every single day, but I refuse to give up. It's opportunities like this that keep me going. Remember that telescope project from the previous year? This is like that on steroids. I also need to say that I'm not actually a student at UCLA, I am an employee. I was paid handsomely for this project, but so was everyone else in my cohort. We are in an Scholars Undergraduate Research program, there are about 12 of us from my school that qualified. We had to take a bunch of classes, buy suits, do mock interviews, they extensively prepared us for our research labs. I will say that as a scholar, I have a 4.0 IF YOU DON'T LOOK AT MY MATH GRADES. SERIOUSLY, LOOK AWAY LEST THEE BE TURNED TO STONE. Luckily for me, I'm fantastic at most everything else academic, and also my skills with reading, writing, and speaking give me a massive advantage because most STEM students can't do any of that at all.
So! I wanted to do Astrophysics, and the lab I originally applied to was called https://gaps1.astro.ucla.edu/gaps/ GAPS. This is a weather balloon they will launch into the atmosphere in Antarctica to search for dark matter. Can you believe it? But no, I wasn't ready for this lab because honestly, I am just not there with my math or physics yet. I cried. Oh, I cried.
THE LAB
So I was placed at the David Geffen School of Medicine in the Orthopedic Research Center. I went in with a BAD attitude, guys. This is not to say I showed it on my exterior, or was rude to anyone of course, but I WAS PISSED. A medical school? But I don't even LIKE PEOPLE, you guys. I've never even taken ANATOMY. I've never even taken BIO. When they told me I had to take a biological science for my degree, I picked fucking Botany. You know why? Because I would rather work with fucking plants than work with people, haha. I was going to work with an antiparticle dark matter balloon, and now I was going to work with... humans *shudder*
However, I really ended up being the luckiest girl in the whole world. Dr. Fabrizio Billi's lab was a great fit for me. Not only were the other student researchers so kind and fun to work with, but they accepted me immediately. Dr. Billi is from Italy and his student researchers are from all over the globe. Every day I would come to lab and walk through the halls, hearing so many different accents and languages. I was the only one who wasn't a med student, lol. With my interest in physics, Dr. Billi found a great project for me.
THE PROJECT
One of the conditions the Billi Lab is currently researching is called Osteolysis. Basically, people will sometimes need a surgical orthopedic joint implant, like the ones I have in my spine only these are in the case of a knee, hip, or shoulder. Due to the nature of a joint bearing, over time, metal-on-metal (MOM) nanoparticles will be released into the joint site leading to a poisoning of the bone and blood called Osteolysis. There is no way to get these nanoparticles out of the patient once they are in there, so the best bet is to prevent the implant from failing in the first place. This is where we come in.
In the past, nanoparticle analysis from MOM wear was always difficult to determine, due to the nature of their nanoscale size and how few of them could be collected. It was like searching for a needle in a haystack. It was actually Dr. Billi who came up with the new, industry standard protocol for how scientists the world over accurately measure and analyze their nanoparticles from MOM wear. Orthopedic companies (such as Depuy Synthe, this is the one that I worked on) will take the implant that they have created, stick it in an orbital load simulator, and agitate the simulated synovial fluid with the implant. They will then send us the fluid, and then we analyze it for nanoparticles. This is a three step process:
1.) Spin the fluid down in the centrifuge at 184,000 gs for 4 hours, we obtain at the bottom of the test tube a pellet of particles and proteins.
2.) We are not interested in the proteins, so we need to add solutions that will break apart the proteins and leave us with the particles. We place a silicone wafer coated in a monolayer of marine mussel glue at the bottom of the second test tube, and due to the nature of solutions of varying densities, the proteins will get lost in the denaturant layer while the MOM nanoparticles are heavy enough to pass through it. We spin it down using density centrifugation again, and the particles adhere to the glue on the silicon wafer. We then take the wafer to be analyzed by...
3.) The EDS integrated into the SEM. This is a powerful Scanning Electron Microscope housed at the basement of the CNSI building at UCLA. You (the researcher) shoot a high powered electron beam at the sample, this causes an electron to become ejected from its orbital, hit the detector, and produce an XRay image for you in a gray scale. You tell the computers all of the parameters for which you'd like to set (ours is between 1-5 microns) and the machine will show you all of the particles that fit those preferences. Then, the Energy Dispersive X-Ray Analysis system will come into play. When the secondary electron becomes ejected, it leaves behind a hole. Other electrons will drop down and replace that hole. This transition releases much energy, energy is directly proportionate to frequency, and each element has its own unique frequency. The machine can then compare it to a library of all the known elements and tell you what your sample is composed of.
So at the end, Dr. Billi sends all of this information I've collected back to Depuy, and we tell them, "hey you assholes, you are leaching cobalt chromium oxide into poor people's bodies, you're going to kill someone you absolute load of buffoons."
And then Dr. Billi gets a trophy. No seriously! He won the John Charnley Award because of inventing this protocol. It's a very prestigious award from the hip society.
For my program, my cohort had to do two presentations about our lab research projects. One was a poster presentation. The other... was a speech that we had to give in a massive lecture hall, it was open to the public, and people were allowed to ask questions. DO YOU KNOW HOW TERRIFYING THAT WAS?! But I did it, and I have never been more proud of myself. I look bitchin in a suit, too.
So this was one of the greatest experiences of my life. I got paid, I got to live on campus, I got to use the UCLA gym and eat at all the yummy places on campus (there's even a Wolfgang Puck, I wish I were lying) and most importantly: I learned that I absolutely love being a scientist, a researcher, and that I am on the right path. I can only image what the universe has in store for me next. :)
Here, have some photos.
3
1
2
This is the most embarrassing piece of work since Clint Eastwood painted his wagon.
- JimothyZombie
- Super Potato
- Reactions: 7065
- Posts: 20024
- Joined: Mon Jan 27, 2020 5:16 am
- Location: In your packets
Re: Keyser's Particle Analysis Thread
You look bitchin always. It's great you found you enjoyed the assignment so much more rewarding than you went in thinking it would be. The work sounds like it was absolutely fascinating. I got to admit, when things get down to the subatomic level, it all starts to boggle my mind. I love that technology has come to the point where we can manipulate that level in so many ways. Bit by bit we are gaining mastery of the universe, and you're part of that. That's fucking rad. It sounds and looks like you had a lot of fun there too.
Thanks for sharing <3
What comes next?
Thanks for sharing <3
What comes next?
1
1
- KeyserSoze
- the space duck queen
- Reactions: 2904
- Posts: 4071
- Joined: Wed Feb 19, 2020 3:15 am
- Location: Los Angeles
Re: Keyser's Particle Analysis Thread
Thanks so much for your support.
Dr. Billi told me I could continue working for them, but they don't have any more funding for me, so that's disappointing. But I'm thinking I should just focus on my math anyway. Hopefully eventually I will apply to UCLA's physics department, and with this research experience under my belt, it can only improve my chances. Dr. Billi was wondering if, after this experience, I would consider switching to biophysics. But like I said, math is the most important thing right now regardless of what subgenre of physics I decide to specialize in and regardless of what institution I transfer to.
I try to read Physics World every day, and they have a big section on job opportunities. Most opportunities are outside of the US, so it's getting me excited about the potential traveling and relocating I might be able to do someday...
Ahhhhh I'm so excited. There are so many cool things happening with physics right now, and I want to do them alllllllll
Dr. Billi told me I could continue working for them, but they don't have any more funding for me, so that's disappointing. But I'm thinking I should just focus on my math anyway. Hopefully eventually I will apply to UCLA's physics department, and with this research experience under my belt, it can only improve my chances. Dr. Billi was wondering if, after this experience, I would consider switching to biophysics. But like I said, math is the most important thing right now regardless of what subgenre of physics I decide to specialize in and regardless of what institution I transfer to.
I try to read Physics World every day, and they have a big section on job opportunities. Most opportunities are outside of the US, so it's getting me excited about the potential traveling and relocating I might be able to do someday...
Ahhhhh I'm so excited. There are so many cool things happening with physics right now, and I want to do them alllllllll
1
1
This is the most embarrassing piece of work since Clint Eastwood painted his wagon.
Re: Keyser's Particle Analysis Thread
That sounds really interesting and a cool thing to be a part of! I like reading about sciencey stuff, you write well.
Where did the 3D printers come into it?
Where did the 3D printers come into it?
0
- KeyserSoze
- the space duck queen
- Reactions: 2904
- Posts: 4071
- Joined: Wed Feb 19, 2020 3:15 am
- Location: Los Angeles
Re: Keyser's Particle Analysis Thread
Oh thank you so much! It really means a lot to me.
I added the 3D printer stuff mostly because @zombie said he was interested in it. The lab does many projects, some of which include building models and braces for surgeons and doctors to use to demonstrate things to their colleagues and patients. We can also make to-scale diagrams of patients existing skeletal structure, which is what they did in the case of a child with a severe spinal deformity.
Companies will send the lab free spools of filament for the 3D printers because they know it's a medical lab and they hope that we will eventually order more from them. But Dr. Billi has such a sheer volume of filament at this point, that he pretty much just lets his students make whatever they want (within reason.) As you can see, someone made some batarangs and a skull up there. One person made a bust of John Wayne for some reason, lol. I got to make a rubber ducky, and a few other things
I added the 3D printer stuff mostly because @zombie said he was interested in it. The lab does many projects, some of which include building models and braces for surgeons and doctors to use to demonstrate things to their colleagues and patients. We can also make to-scale diagrams of patients existing skeletal structure, which is what they did in the case of a child with a severe spinal deformity.
Companies will send the lab free spools of filament for the 3D printers because they know it's a medical lab and they hope that we will eventually order more from them. But Dr. Billi has such a sheer volume of filament at this point, that he pretty much just lets his students make whatever they want (within reason.) As you can see, someone made some batarangs and a skull up there. One person made a bust of John Wayne for some reason, lol. I got to make a rubber ducky, and a few other things
0
This is the most embarrassing piece of work since Clint Eastwood painted his wagon.
- JimothyZombie
- Super Potato
- Reactions: 7065
- Posts: 20024
- Joined: Mon Jan 27, 2020 5:16 am
- Location: In your packets
Re: Keyser's Particle Analysis Thread
The hand is wicked cool. Was that for science or fun? Just saw how long it took for the skull. I can't believe he would allow a printer to be tied up for almost 9 hours what a rad dude.
I'd love to get back to spending more time studying maths. I was doing it mostly for my own interest but I figure it will be useful for all sorts of other things I work on. I'm flat out making ends at the moment and I'm starting to resent not working in areas I'd prefer. I did get to learn some HTML recently, which was cool.
My mind seems totally unwired for maths but I find it fascinating. I admire your dedication to grinding through it.
I'd love to get back to spending more time studying maths. I was doing it mostly for my own interest but I figure it will be useful for all sorts of other things I work on. I'm flat out making ends at the moment and I'm starting to resent not working in areas I'd prefer. I did get to learn some HTML recently, which was cool.
My mind seems totally unwired for maths but I find it fascinating. I admire your dedication to grinding through it.
1
1
Re: Keyser's Particle Analysis Thread
This is so awesome. Keyser, you're really hot.
- nagoline
- genuine magenta lamprey
- Reactions: 4580
- Posts: 13565
- Joined: Mon Jan 27, 2020 7:34 am
- Location: all of the sewers
Re: Keyser's Particle Analysis Thread
beautiful on the inside and out, that brain is amazing
1
1
"knows all the cool opium dens"
- JimothyZombie
- Super Potato
- Reactions: 7065
- Posts: 20024
- Joined: Mon Jan 27, 2020 5:16 am
- Location: In your packets
- KeyserSoze
- the space duck queen
- Reactions: 2904
- Posts: 4071
- Joined: Wed Feb 19, 2020 3:15 am
- Location: Los Angeles
Re: Keyser's Particle Analysis Thread
D'awwww, I didn't forget! I actually thought more people would have been interested in it, but oh well
It's hard to get people excited about nanoparticles.
You guys are very kind. I have a rule about not wearing makeup to lab so, sorry about the no makeup photos. I save that for the presentation days and shock everyone, lol.
I am never satisfied. I'm constantly pushing myself to be the best person I can ber; physically, educationally, mentally, spiritually, I have to be constantly improving myself. In between formulas I am going to the gym, or cramming as many vegetables as will fit into my face.
@zombie I honestly can't remember whether the hand was for a project or just for fun! Maybe a bit of both?
It's hard to get people excited about nanoparticles.
You guys are very kind. I have a rule about not wearing makeup to lab so, sorry about the no makeup photos. I save that for the presentation days and shock everyone, lol.
I am never satisfied. I'm constantly pushing myself to be the best person I can ber; physically, educationally, mentally, spiritually, I have to be constantly improving myself. In between formulas I am going to the gym, or cramming as many vegetables as will fit into my face.
@zombie I honestly can't remember whether the hand was for a project or just for fun! Maybe a bit of both?
1
1
Last edited by KeyserSoze on Wed Feb 26, 2020 3:08 pm, edited 1 time in total.
This is the most embarrassing piece of work since Clint Eastwood painted his wagon.
- JimothyZombie
- Super Potato
- Reactions: 7065
- Posts: 20024
- Joined: Mon Jan 27, 2020 5:16 am
- Location: In your packets
Re: Keyser's Particle Analysis Thread
Maybe people skip over this forum, which is a shame. Or maybe they are all just philistines Present company excluded, of course. I think you wrote it up well. I could imagine you maybe writing stuff for publishing in pop science journals. You have that knack for explaining stuff for the every man.
I'm with you. Always work on self-improvement. There are few tasks worth more attention. Cycling and weights is my new thing, and I'm still reading text books on device networking between learning new things for work.
I'm with you. Always work on self-improvement. There are few tasks worth more attention. Cycling and weights is my new thing, and I'm still reading text books on device networking between learning new things for work.
1
1
Re: Keyser's Particle Analysis Thread
Keyser, you are so perfect just the way you are, so please be kind to yourself. Yes, self improvement is important, but to some extent, be content with the person that you are, and allow for authentic self love at your core.KeyserSoze wrote: ↑Wed Feb 26, 2020 3:07 pmD'awwww, I didn't forget! I actually thought more people would have been interested in it, but oh well
It's hard to get people excited about nanoparticles.
You guys are very kind. I have a rule about not wearing makeup to lab so, sorry about the no makeup photos. I save that for the presentation days and shock everyone, lol.
I am never satisfied. I'm constantly pushing myself to be the best person I can ber; physically, educationally, mentally, spiritually, I have to be constantly improving myself. In between formulas I am going to the gym, or cramming as many vegetables as will fit into my face.
@zombie I honestly can't remember whether the hand was for a project or just for fun! Maybe a bit of both?
I used to be hyper obsessed with self improvement to a point where I sort of self sabotaged in the name of self improvement- and pushed myself too hard in a dead end job that replaced me within a heartbeat.
So I guess you gotta value yourself and know your limits, and I urge you to be sure to take gentle care of yourself.
Not saying you don't do those things, because again, I don't know. But I don't want to see you destroy yourself by trying to focus intensely on self improvement to a degree where you just screw up your inner psyche.
I find you to be very impressive.
- KeyserSoze
- the space duck queen
- Reactions: 2904
- Posts: 4071
- Joined: Wed Feb 19, 2020 3:15 am
- Location: Los Angeles
Re: Keyser's Particle Analysis Thread
I've been trying to come up with a response to this that doesn't sound rude.
But I feel like it's hard to take advice from you after everything I've read from you in the forum.
But I feel like it's hard to take advice from you after everything I've read from you in the forum.
1
1
This is the most embarrassing piece of work since Clint Eastwood painted his wagon.
- JimothyZombie
- Super Potato
- Reactions: 7065
- Posts: 20024
- Joined: Mon Jan 27, 2020 5:16 am
- Location: In your packets
Re: Keyser's Particle Analysis Thread
Chloe is not qualified to give advice outside for fun MBTI threads. Be rude.
1
1
Re: Keyser's Particle Analysis Thread
Keyser, I wasn't trying to be rude. My apologies. I just worry about people overdoing and then not taking care of themselves, because I have a bad habit of doing that.
Please don't hate me.
Please don't hate me.
- KeyserSoze
- the space duck queen
- Reactions: 2904
- Posts: 4071
- Joined: Wed Feb 19, 2020 3:15 am
- Location: Los Angeles
Re: Keyser's Particle Analysis Thread
I don't think you're being rude, I was trying to come up with a response to your comment, but I couldn't come up with a "nice" way to say what I needed. I just don't think you're in a spot in your life to be telling someone they're being too hard on themselves. The only reason I've made it this far is because I've been hard on myself. If I wasn't, I would just sit around all day with no job and get drunk and talk shit on internet forums. I don't buy into this whole "you need to love yourself 100% and be 100% happy with who you are exactly as you are" because it doesn't leave a whole lot of incentive to improve.
0
This is the most embarrassing piece of work since Clint Eastwood painted his wagon.
- JimothyZombie
- Super Potato
- Reactions: 7065
- Posts: 20024
- Joined: Mon Jan 27, 2020 5:16 am
- Location: In your packets
Re: Keyser's Particle Analysis Thread
You can both love yourself and be a critical little bitch too. Maybe that's why I never feel lonely It's like I'm already in a relationship.
1
1
- KeyserSoze
- the space duck queen
- Reactions: 2904
- Posts: 4071
- Joined: Wed Feb 19, 2020 3:15 am
- Location: Los Angeles
Re: Keyser's Particle Analysis Thread
Every time I try to entertain the “I love myself” mantra, it’s immediately interrupted by the thought, “but I can be better!”
1
1
This is the most embarrassing piece of work since Clint Eastwood painted his wagon.
- JimothyZombie
- Super Potato
- Reactions: 7065
- Posts: 20024
- Joined: Mon Jan 27, 2020 5:16 am
- Location: In your packets
Re: Keyser's Particle Analysis Thread
Well, you're pretty awesome, so I hope you take some pride in that <3
0
- JimothyZombie
- Super Potato
- Reactions: 7065
- Posts: 20024
- Joined: Mon Jan 27, 2020 5:16 am
- Location: In your packets
Re: Keyser's Particle Analysis Thread
I'm cleaning up Keyser's pretty thread. No more derailing it with Chamer story time pls thnk u - The Proprietor
2
2